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Detection of Alb-haA1 transgenic mouse allele by
genomic DNA PCR analysis |
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DNA prep: |
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Prepare genomic DNA using proteinaseK
method. (the NaOH method is less effective) |
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PCR primer |
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Sense |
haGADD34.1S |
5Õ CGG GCT GCA GGA ATT CGA TCT CGT T 3Õ |
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Antisense |
haGADD34. 6AS |
5Õ CTG TGT CCT CTC CAG GGC AAC AGA C 3Õ |
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PCR fragment |
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335 |
bp |
only in transgenic mouse |
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PCR solution |
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set |
×1 |
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ddH2O |
18.05 |
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10× buf |
2.5 |
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2.5 mM dNTP |
1.25 |
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20 uM SP |
0.5 |
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20 uM AP |
0.5 |
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homemade Taq |
0.2 |
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genomic DNA * |
2 |
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25 |
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homemade 10x buffer (500mM
Tris pH 9.0, 200mM NH4SO4, 15mM MgCl2) |
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* DNA dilution (1/20-1/50) may increase
sensitivity of PCR reaction |
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PCR protocol |
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Denature |
96 ℃ |
5 min |
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Denature |
94 ℃ |
1 min |
35 – 40 cycles |
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Anneal |
55 ℃ |
1 min |
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Extend |
72 ℃ |
1 min |
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Extend |
72 ℃ |
7 min |
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End |
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